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131 - 140 of 144 items
  • Department:(Dept. 3) Plankton and Microbial Ecology
May 2021
Environmental Microbiology Reports. - 13(2021)3, 337-347

Variation of bacterial communities along the vertical gradient in Lake Issyk Kul, Kyrgyzstan

Keilor Rojas-Jimenez; Alex Araya-Lobo; Fabio Quesada-Perez; Johana Akerman-Sanchez; Brayan Delgado-Duran; Lars Ganzert; Peter O. Zavialov; Salmor Alymkulov; Georgiy Kirillin; Hans-Peter Grossart

Diversity and community composition of bacteria along vertical gradients were studied in Lake Issyk Kul, Kyrgyzstan, the 6th deepest lake worldwide and the largest high-altitude lake. In the molecular assessment, the 16S rRNA gene analysis revealed significant changes in the composition, responding mainly to depth and salinity with Planctomycetes and Chloroflexi dominating in the deepest layers.

April 2021
Remote Sensing. - 13(2021)8, Art. 1542

The use of Sentinel-2 for Chlorophyll-a spatial dynamics assessment: a comparative study on different lakes in Northern Germany

Igor Ogashawara; Christine Kiel; Andreas Jechow; Katrin Kohnert; Thomas Ruhtz; Hans-Peter Grossart; Franz Hölker; Jens C. Nejstgaard; Stella A. Berger; Sabine Wollrab

This study is an important step to establish the use of satellite imagery for inland water quality monitoring. By using in situ measurements of the algal pigment chlorophyll-a from small-sized lowland lakes in Northern Germany, we identified the best performing atmospheric correction and bio-optical algorithm to accurately estimate chlorophyll-a from Sentinel 2 satellite images. 

March 2021
The American Naturalist. - 197(2021)3, 281-295

Climate change – driven regime shifts in a planktonic food web

Sabine Wollrab; Lyubov Izmest’yeva (Любовь Р. Изместьева); Stephanie E. Hampton; Eugene A. Silow (Евгений А. Зилов); Elena Litchman; Christopher A. Klausmeier

Climate change causes a decrease in the ice cover on lakes throughout the world. Yet, there has been insufficient research into how this decline of the winter period affects the interplay of phytoplankton and zooplankton. This study shows that even a gradual decline in the average duration of ice cover can result in abrupt changes in plankton dynamics.

January 2021
The ISME journal. - 15(2021), 1695–1708

Mesopelagic microbial carbon production correlates with diversity across different marine particle fractions

Chloé M. J. Baumas; Frédéric A. C. Le Moigne; Marc Garel; Nagib Bhairy; Sophie Guasco; Virginie Riou; Fabrice Armougom; Hans-Peter Grossart; Christian Tamburini

The vertical flux of marine snow reduces atmospheric CO2. In particular, particle associated prokaryotes are responsible for organic C-loss. Analysis of prokaryotic heterotrophic production a. species richness in the North Atlantic reveal that C- loss a. associated microbial richness are different with particle fractions. Especially large, fast-sinking particles drive C-flux a. -sequestration.

 

January 2021
The ISME journal. - 15(2021), 1735–1750

Zooplankton carcasses stimulate microbial turnover of allochthonous particulate organic matter

Darshan Neubauer; Olesya Kolmakova; Jason Woodhouse; Robert Taube; Kai Mangelsdorf; Michail Gladyshev; Katrin Premke; Hans-Peter Grossart

This study investigated whether the microbial degradation of more refractory organic matter (OM) is stimulated by the addition of well available OM from dead zooplankton. A significantly higher respiration was measured when zooplankton-derived OM was added to ratio of 1:1. Stimulation was stronger in a complex microbial community with eukaryotes than just bacteria. 

January 2021
Scientific Reports. - 10(2020), art. 20444

Metabolomics-derived marker metabolites to characterize Phaeocystis pouchetii physiology in natural plankton communities

Constanze Kuhlisch; Julia Althammer; Andrey F. Sazhin; Hans H. Jakobsen; Jens C. Nejstgaard; Georg Pohnert

Phaeocystis pouchetii regularly dominates Arctic marine plankton and is considered a key food source supporting highly productive fisheries. But the relevance of biomass transfer to higher trophic levels is debated. This study shows that endometabolic markers can be correlated to the metabolic state of Phaeocystis populations, which allows testing the influence on zooplankton trophic transfer.

January 2021
Environmental Science. Nano. - 7(2020)7, S. 2130-2139

Nanosilver impacts on aquatic microbial decomposers and litter decomposition assessed as pollution-induced community tolerance (PICT)

Daniela Batista; Ahmed Tlili; Mark O. Gessner; Cláudia Pascoalab and Fernanda Cássio

The authors have shown that shifts in microbial communities triggered by chronic exposure to low concentrations of silver nanoparticles increases the community tolerance to silver, as described in the pollution-induced community tolerance (PICT) concept, with consequences for leaf litter decomposition, a pivotal process in forest streams. 

January 2021
Environmental Pollution. - 264(2020), art. 114793

Uptake and physiological effects of the neonicotinoid imidacloprid and its commercial formulation Confidor® in a widespread freshwater oligochaete

Valeska Contardo-Jara; Mark O.Gessner

The neonicotinoid imidacloprid (IMI) is one of the most extensively applied neuro-active insecticides worldwide and continues to enter surface waters in many countries despite a recent ban for outdoor use in the EU. The study assessed the effects of pure IMI and its commercial formulation Confidor® on the aquatic oligochaete Lumbriculus variegatus, a key species in freshwater sediments.

January 2021
Molecular Biology and Evolution. - 38(2021)3, 1040–1059

Heterozygous, polyploid, giant bacterium, Achromatium, possesses an identical functional inventory worldwide across drastically different ecosystems

Danny Ionescu; Luca Zoccarato; Artur Zaduryan; Sina Schorn; Mina Bizic; Solvig Pinnow; Heribert Cypionka; Hans-Peter Grossart

The largest freshwater bacterium, Achromatium oxaliferum, is highly flexible in its requirements. The bacterial strains from the different ecosystems do not differ in their gene content, but rather choose what to express.

December 2020
Scientific Reports. - 10(2020), art. 22234

A probabilistic approach to dispersal in spatially explicit meta‑populations

Rajat Karnatak; Sabine Wollrab

The authors developed a new, probability-based formalism for modeling species distribution.The Network-based Probabilistic Connectivity (NPC) can provide predictions about the distribution and persistence of species at different time scales, and their dependence on patch distribution and patch density in the landscape.