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  • Department:(Dept. 3) Plankton and Microbial Ecology
Nature_Protocols
October 2023
Nature Protocols. - 18(2023) 3534–3564

Exposure protocol for ecotoxicity testing of microplastics and nanoplastics

Fazel Abdolahpur Monikh; Anders Baun; Nanna B. Hartmann; Raine Kortet; Jarkko Akkanen; Jae-Seong Lee; Huahong Shi; Elma Lahive; Emilia Uurasjärvi; Nathalie Tufenkji; Korinna Altmann; Yosri Wiesner; Hans-Peter Grossart; Willie Peijnenburg; Jussi V. K. Kukkonen

Despite the increasing concern about the harmful effects of micro- and nanoplastics (MNPs), so far, there exist no harmonised guidelines for testing the ecotoxicity of MNPs. An international research team with IGB has now developed protocols to assess the toxicity of these substances in soil and aquatic ecosystems.

Biological_Reviews
September 2023
Biological Reviews. - 98(2023)5, 1530-1547

Hypotheses in urban ecology: building acommon knowledge base

Sophie Lokatis; Jonathan M. Jeschke; Maud Bernard-Verdier; Sascha Buchholz; Hans-Peter Grossart; Frank Havemann; Franz Hölker; Yuval Itescu; Ingo Kowarik; Stephanie Kramer-Schadt; Daniel Mietchen; Camille L. Musseau; Aimara Planillo; Conrad Schittko; Tanja M. Straka; Tina Heger

This study identified 62 research hypotheses used in urban ecology and mapped them in a conceptual network. It is the first such network, which also clusters urban ecology hypotheses into four distinct themes: (i) Urban species traits & evolution, (ii) Urban biotic communities, (iii) Urban habitats and (iv) Urban ecosystems.

September 2023
Nature. - 619(2023), S. 317–322

Plastic debris in lakes and reservoirs

Veronica Nava; Sudeep Chandra; Julian Aherne; María B. Alfonso; Ana M. Antão-Geraldes; Katrin Attermeyer; Roberto Bao; Mireia Bartrons; Stella A. Berger; Marcin Biernaczyk; Raphael Bissen; Justin D. Brookes; David Brown; Miguel Cañedo-Argüelles; Moisés Canle; Camilla Capelli; Rafael Carballeira; José Luis Cereijo; Sakonvan Chawchai; Søren T. Christensen; Kirsten S. Christoffersen; Elvira de Eyto; Jorge Delgado; Tyler N. Dornan; Jonathan P. Doubek; Julia Dusaucy; Oxana Erina; Zeynep Ersoy; Heidrun Feuchtmayr; Maria Luce Frezzotti; Silvia Galafassi; David Gateuille; Vitor Gonçalves; Hans-Peter Grossart; David P. Hamilton; Ted D. Harris; Külli Kangur; Gökben Başaran Kankılıç; Rebecca Kessler; Christine Kiel; Edward M. Krynak; Àngels Leiva-Presa; Fabio Lepori; Miguel G. Matias; Shin-ichiro S. Matsuzaki; Yvonne McElarney; Beata Messyasz; Mark Mitchell; Musa C. Mlambo; Samuel N. Motitsoe; Sarma Nandini; Valentina Orlandi; Caroline Owens; Deniz Özkundakci; Solvig Pinnow; Agnieszka Pociecha; Pedro Miguel Raposeiro; Eva-Ingrid Rõõm; Federica Rotta; Nico Salmaso; S. S. S. Sarma; Davide Sartirana; Facundo Scordo; Claver Sibomana; Daniel Siewert; Katarzyna Stepanowska; Ülkü Nihan Tavşanoğlu; Maria Tereshina; James Thompson; Monica Tolotti; Amanda Valois; Piet Verburg; Brittany Welsh; Brian Wesolek; Gesa A. Weyhenmeyer; Naicheng Wu; Edyta Zawisza; Lauren Zink; Barbara Leoni

Microplastics are found in lakes and reservoirs around the world. Pollution reaches even the most secluded places where human influence is minimal. Moreover, concentrations of microplastics in freshwaters are sometimes higher than in subtropical gyres, the marine areas where large amounts of waste accumulate. 

August 2023
Applied and Environmental Microbiology. - 89(2023)7, e00539-23

Phytoplankton Producer Species and Transformation of Released Compounds over Time Define Bacterial Communities following Phytoplankton Dissolved Organic Matter Pulses

Falk Eigemann; Eyal Rahav; Hans-Peter Grossart; Dikla Aharonovich; Maren Voss; Daniel Sher

Bacterial responses to phytoplankton exudates (DOMp) may be caused by different DOMp compositions. Thereby, the bacterial community leads to a succession of DOMp from highly to less bioavailable, reflected by the temporal presence of specific bacterial phylotypes. The exploitation of species-specific highly bioavailable compounds, results in a more similar remaining DOMp.

 

May 2023
Journal of Geophysical Research : Biogeosciences. - 128(2023)4, Art. e2022JG007328

Habitability of Polygonal Soils in the Hyper-Arid Atacama Desert After a Simulated Rain Experiment

Christof Sager; Alessandro Airo; Kai Mangelsdorf; Felix L. Arens; Cornelia Karger; Dirk Schulze-Makuch

The dryness in the Atacama Desert led to fracture networks of salt-poor sand wedges outlining salt-rich polygons as potential microbial habitats. Mineral composition, pH, electrical and thermal conductivity, water activity and content were analyzed for their relevance to habitability. The results emphasize the relevance of polygonal networks as microbial habitats in extreme environments.

March 2023
Limnology and Oceanography Letters. - 8(2023)4, 546-564

Blooms also like it cold

Kaitlin L. Reinl; Ted D. Harris; Rebecca L. North; Pablo Almela; Stella A. Berger; Mina Bizic; Sarah H. Burnet; Hans-Peter Grossart; Bastiaan W Ibelings; Ellinor Jakobsson; Lesley B. Knoll; Brenda M. Lafrancois; Yvonne McElarney; Ana M. Morales-Williams; Ulrike Obertegger; Igor Ogashawara; Ma Cristina Paule-Mercado; Benjamin L. Peierls; James A. Rusak; Siddhartha Sarkar; Sapna Sharma; Jessica V. Trout-Haney; Pablo Urrutia-Cordero; Jason J. Venkiteswaran; Danielle J. Wain; Katelynn Warner; Gesa A. Weyhenmeyer; Kiyoko Yokota

Cyanobacteria are considered to be heat-loving, and massive algal blooms are reported mainly in summer, when monitoring is particularly close. Now, the authors show that cyanobacterial blooms can also occur at colder temperatures - even under ice. If the algal blooms go unnoticed, there are risks to drinking water production.

November 2022
Environmental Microbiology. - 24(2022)11, 5051 - 5065

Perchlorate-specific proteomic stress responses of Debaryomyces hansenii could enable microbial survival in Martian brines

Jacob Heinz ; Joerg Doellinger ; Deborah Maus ; Andy Schneider ; Peter Lasch ; Hans-Peter Grossart ; Dirk Schulze-Makuch

No life has yet been found on Mars, but it is exciting to explore under what circumstances it might be possible. The authors have studied the cellular processes that regulate the adaptation of microorganisms to perchlorates. If microorganisms could genetically adapt their stress response to this salt, their survival on the red planet might be possible.

November 2022
Global Biogeochemical Cycles. - 36(2022)3

Global patterns and controls of nutrient immobilization on decomposing cellulose in riverine ecosystems

David M. Costello ; Scott D. Tiegs ; Luz Boyero ; Cristina Canhoto ; Krista A. Capps ; Michael Danger ; Paul C. Frost ; Mark O. Gessner ; Natalie A. Griffiths ; Halvor M. Halvorson ; Kevin A. Kuehn ; Amy M. Marcarelli ; Todd V. Royer ; Devan M. Mathie ; Ricardo J. Albariño ; Clay P. Arango ; Jukka Aroviita ; Colden V. Baxter ; Brent J. Bellinger ; Andreas Bruder ; Francis J. Burdon ; Marcos Callisto ; Antonio Camacho ; Fanny Colas ; Julien Cornut ; Verónica Crespo-Pérez ; Wyatt F. Cross ; Alison M. Derry ; Michael M. Douglas ; Arturo Elosegi ; Elvira de Eyto ; Verónica Ferreira ; Carmen Ferriol ; Tadeusz Fleituch ; Jennifer J. Follstad Shah ; André Frainer ; Erica A. Garcia ; Liliana García ; Pavel E. García ; Darren P. Giling ; R. Karina Gonzales-Pomar ; Manuel A.S. Graça ; Hans-Peter Grossart ; François Guérold ; Luiz U. Hepp ; Scott N. Higgins ; Takuo Hishi ; Carlos Iñiguez-Armijos ; Tomoya Iwata ; Andrea E. Kirkwood ; Aaron A. Koning ; Sarian Kosten ; Hjalmar Laudon ; Peter R. Leavitt ; Aurea L. Lemes da Silva ; Shawn J. Leroux ; Carri J. LeRoy ; Peter J. Lisi ; Frank O. Masese ; Peter B. McIntyre ; Brendan G. McKie ; Adriana O. Medeiros ; Marko Miliša ; Yo Miyake ; Robert J. Mooney ; Timo Muotka ; Jorge Nimptsch ; Riku Paavola ; Isabel Pardo ; Ivan Y. Parnikoza ; Christopher J. Patrick ; Edwin T.H.M. Peeters ; Jesus Pozo ; Brian Reid ; John S. Richardson ; José Rincón ; Geta Risnoveanu ; Christopher T. Robinson ; Anna C. Santamans ; Gelas M. Simiyu ; Agnija Skuja ; Jerzy Smykla ; Ryan A. Sponseller ; Franco Teixeira-de Mello ; Sirje Vilbaste ; Verónica D. Villanueva ; Jackson R. Webster ; Stefan Woelfl ; Marguerite A. Xenopoulos ; Adam G. Yates ; Catherine M. Yule ; Yixin Zhang ; Jacob A. Zwart

The research team used a standardized, low-nutrient organic matter substrate (cotton strips) to quantify nutrient immobilization at 100 paired stream and riparian sites representing 11 biomes worldwide. Immobilization rates varied by three orders of magnitude, were greater in rivers than riparian zones, and were strongly correlated to decomposition rates. 

November 2022
Nature Communications. - 13(2022), Art. 4974

Towards critical white ice conditions in lakes under global warming

Gesa A. Weyhenmeyer ... Hans-Peter Grossart ...

The quality of lake ice is of paramount importance for ice safety and lake ecology under ice. In 2020/2021, the researchers conducted a coordinated sampling campaign of lake ice quality during one of the warmest winters since 1880. They showed that lake ice during this period generally consisted of unstable white ice, which at times accounted for up to 100 percent of the total ice thickness.

November 2022
Limnology and Oceanography Letters. - 8(2023)2, S. 247-266

Environmental variability in aquatic ecosystems: avenues for future multifactorial experiments

Miriam Gerhard ... Stella A. Berger ... Jens C. Nejstgaard ...

Variability is inherent to all natural ecosystems, yet the consequences of alterations to existing variability patterns in environmental factors expected under global change scenarios remain unclear. The authors identified sources of mismatches, challenges, and knowledge gaps to contribute to a research agenda on the effects of variability in aquatic systems. T