(Dept. 3) Plankton and Microbial Ecology

Research in the Department of Plankton and Microbial Ecology on the shores of Lake Stechlin centres on impacts of global environmental change on inland waters. Consequences on the biodiversity and functioning of plankton communities in lakes receive particular attention. This includes investigations into the dynamics, activities and interactions of bacteria, phytoplankton, zooplankton and fungi. Field experiments, especially in a large outdoor facility dubbed the LakeLab in Lake Stechlin, are a hallmark of research in the department. Other essential elements are the analysis of long-term data, laboratory experiments and the development of ecological models and new methods to analyse plankton communities. We use the knowledge gained in theses studies to devise concepts and methods that foster the protection and sustainable management of inland waters in the face of ongoing environmental change.

Research groups

Stella A. Berger
Mark Gessner
Hans-Peter Grossart
Jens Christian Nejstgaard
Sabine Wollrab

Department members

Selected publications

Cover_Scientific_Data
June 2025
Scientific Data. - 12(2025), Art. 1028

Fifty years of limnological data on Lake Stechlin, a temperate clearwater lake

Sabine Wollrab; Silke R. Schmidt; Jason Woodhouse; Peter Kasprzak; Stella A. Berger; Ute Beyer; Matthias Bodenlos; Johanna Dalchow; Monika Degebrodt; Lars Ganzert; Thomas Gonsiorczyk; Elfi Huth; Christine Kiel; Lutz Küchler; Lothar Krienitz; Maren Lentz; Elke Mach; Uta Mallok; Jens C. Nejstgaard; Monika Papke; Armin Penske; Solvig Pinnow; Reingard Roßberg; Diethelm Ronneberger; Michael Sachtleben; Adelheid Scheffler; Hans-Peter Grossart; Peter Casper; Mark O. Gessner; Rainer Koschel

The presented dataset from Lake Stechlin covers basic water-chemical and physical records taken at monthly to fortnightly intervals from 1970 to 2020, documenting limnological changes during that period. Furthermore, it serves as a valuable basis to assess and project potential consequences of climate change and other types of environmental change on deep clearwater lakes in temperate climates.

February 2025
Oikos. - 2025(2025)5, Art. e11020

Addressing grand ecological challenges in aquatic ecosystems: how can mesocosms be used to advance solutions?

Samuel J. Macaulay; Erik Jeppesen; Ulf Riebesell; Jens C. Nejstgaard; Stella A. Berger; Aleksandra M. Lewandowska; Andreu Rico; Ben J. Kefford; Csaba F. Vad; David M. Costello; Haijun Wang; Iris Madge Pimentel; Joana Barcelos e Ramos; Jose González; Kristian Spilling; Lisette de Senerpont Domis; Maarten Boersma; Maria Stockenreiter; Mariana Meerhoff; Martina G. Vijver; Mary Kelly-Quinn; Meryem Beklioğlu; Miguel G. Matias; Michael Sswat; Noël P. D. Juvigny-Khenafou; Patrick Fink; Peiyu Zhang; Ricardo H. Taniwaki; Robert Ptacnik; Silke Langenheder; Tom A. P. Nederstigt; Zsófia Horváth; Jeremy J. Piggott

Marine and freshwater researchers using mesocosms synthesise their recommendations on opportunities and limitations for advancing solutions to grand ecological challenges in aquatic ecosystems. They focus on the unexplored potential for using mesocosms to test solutions to human impacts on aquatic ecosystems. This will need novel collaborations between ecologists and technological developers.

January 2025
Limnology and Oceanography Letters. - 10(2025)2, 151-157

Tried and true vs. shiny and new: Method switching in long-term aquatic datasets

Catriona L. C. Jones; Kelsey J. Solomon; Emily R. Arsenault; Katlin D. Edwards; Atefah Hosseini; Hadis Miraly; Alexander W. Mott; Karla Münzner; Igor Ogashawara; Carly R. Olson; Meredith E. Seeley; John C. Tracey

There is a shortage of discourse regarding the best practices in switching methods for long-term data collection in aquatic ecosystems. In this paper, factors that contribute to the successes and failures of method switches are discussed. The authors present three case studies that demonstrate successful method switching and then outline best practices for maintaining data integrity.

December 2024
Remote Sensing. - 16(2024)22, Art. 4327

Secchi Depth Retrieval in Oligotrophic to Eutrophic Chilean Lakes Using Open Access Satellite-Derived Products

Daniela Rivera-Ruiz; José Luis Arumí; Mario Lillo-Saavedra; Carlos Esse; Patricia Arancibia-Ávila; Roberto Urrutia; Marcelo Portuguez-Maurtua; Igor Ogashawara

In this study, the use of open access satellite data for estimating Secchi disk depths in 3 lakes in Chile was investigated. In the oligotrophic Lake Panguipulli, no relationship was observed between estimated and measured Secchi disk depths. This highlight the need for methodological advances in the processing of satellite-derived water quality products,s, especially for very clear waters.

Global_Change_Biology
November 2024
Global Change Biology. - 30(2024)11, e17575

Rapid Eutrophication of a Clearwater Lake: Trends and Potential Causes Inferred From Phosphorus Mass Balance Analyses

Thomas Gonsiorczyk; Michael Hupfer; Sabine Hilt; Mark O. Gessner

In just 10 years, the phosphorus concentration in Lake Stechlin has quadrupled, which has been accompanied by algal blooms, oxygen depletion in the deep water and other signs of eutrophication. The study now shows that the causes are not always to be found in increasing nutrient inputs from the catchment or in re-dissolution processes in the deep areas of the lake, but also in the shallower parts.