Kuhl et al. (preprint)
The haplotype-resolved Prymnesium parvum (type B) microalga genome reveals the genetic basis of its fish-killing toxins
bioRxiv

Thomé et al. (in press)
Phylogenomics including new sequence data of phytoplankton-infecting chytrids reveals multiple independent lifestyle transitions across the phylum
Molecular Phylogenetics and Evolution

Warter et al. (2024)
Environmental DNA, hydrochemistry and stable water isotopes as integrative tracers of urban ecohydrology
Water Research 250:121065

Thomé et al. (2023)
Single-cell genomics reveals new Rozellid lineages and supports their sister relationship to Microsporidia.
Biology Letters 10.1098/rsbl.2023.0398

Theissinger et al. (2023)
How genomics can help biodiversity conservation.
Trends in Genetics 39:545-559

Sukhodolov et al. (2023)
Interactions between diurnal winds and floodplain mosaics control the insect boundary layer in a river corridor.
Aquatic Sciences 85:109.

Strassert & Monaghan (2022)
Phylogenomic insights into the early diversification of fungi.
Current Biology 32:3628-3635.e3.

Premke et al. (2022)
Large-scale sampling of the freshwater microbiome suggests pollution-driven ecosystem changes.
Environmental Pollution 308:119627.   

Sire et al. (2022)
Climate-induced forest dieback drives compositional changes in insect communities that are more pronounced for rare species.
Communications Biology 5:57.

Maasri et al. (2022)
A global agenda for advancing freshwater biodiversity research.
Ecology Letters 25:255-263.

Formenti et al. (2022)
The era of reference genomes in conservation genomics.
Trends in Ecology and Evolution 37:197-202.

Welti et al. (2022)
Temperature drives variation in flying insect biomass across a German malaise trap network.
Insect Conservation and Diversity 15:168-180.

Heeger et al. (2021)
Evidence for lignocellulose-decomposing enzymes in the genome and transcriptome of the aquatic hyphomycete Clavariopsis aquatica.
Journal of Fungi 7:854.

Beng et al. (2021)
Temporal dynamics of freshwater planktonic parasites inferred using a DNA metabarcoding time-series.
Parasitology 148:1602-1611.

Rutschmann et al. (2021)
Three mitochondrial genomes of early-winged insects (Ephemeroptera: Baetidae and Leptophlebiidae).
Mitochondrial DNA Part B: Resources 6:2969-2971

Hoffmann et al. (2021)
PriSeT: Efficient de novo primer discovery.
Proceedings of the 12th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics Article No.: 2, pp. 1-12.

Rodriguez-Ezpeleta et al. (2021)
Trade-offs between reducing complex terminology and producing accurate interpretations from environmental DNA.
Molecular Ecology 30:4601-4605.

Bracamonte et al. (2021)
Encapsulation of Anguillicola crassus reduces the abundance of adult parasite stages in the European eel (Anguilla anguilla).
Journal of Fish Diseases 44:771-782.

van Rees et al. (2021)
Safeguarding freshwater life beyond 2020: recommendations for the new Global Biodiversity Framework from the European experience.
Conservation Letters 14:e12771

Jähnig et al. (2021)
Revisiting global trends in freshwater insect biodiversity.
WIREs Water 8:e1506.

Link to complete list

Freie Universität Berlin

Institut für Biologie (FB Biologie, Chemie, Pharmazie)

• 23204 Data Science in Biology (ABV)
• 23306 Experimental and Theoretical Evolutionary Ecology
• 23308 Biotic Interactions in a Changing World
• Projekt (10 LP)
• Forschungsprojekt (15 LP)
• Masterarbeit

Institut für Informatik (FB Mathematik und Informatik)

• 23779 Biodiversität und Evolution
• 23780 Umweltgenomik (Praxisseminar)
• 23781 Evolutionary Bioinformatics and NGS Applications (Seminar)
• Research Internship (10 LP)
• Masterarbeit